CLI: sort¶
Synopsis¶
Sort a TWO file.
Examples¶
1 | tomahawk sort -i 1kgp3_chr6.two -o 1kgp3_chr6_sorted.two -m 1 -c 10 -t 28 |
Options¶
1 2 3 4 5 6 | Options: -i FILE input TWO file (required) -o FILE output file (- for stdout; default: -) -m FLOAT maximum memory usage per thread in GB (default: 0.5) -c INT compression level 1-20 (default: 1) -t INT number of threads (default: maximum available) |